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Dr. Pinki Dey
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English -
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Hindi -
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Bengali -
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Assamese -
Bio
Credentials
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Focus on Peer Review
Nature Research (Publishing)Oct, 2020- Apr, 2026 -
ChIP-seq with Bioconductor in R
DataCampMay, 2020- Apr, 2026 -
Introduction to R
DataCampMay, 2020- Apr, 2026 -
RNA-Seq with Bioconductor in R
DataCampMay, 2020- Apr, 2026 -
Single-Cell RNA-Seq with Bioconductor in R
DataCampMay, 2020- Apr, 2026 -
Research Member
Indian Biophysical SocietyJan, 2017- Apr, 2026 -
Project Research Fellowship
Department of Science and Technology, InJan, 2016- Apr, 2026 -
Graduate Aptitude Test of Engineering, India
Indian Institute of Technology, BombayMay, 2015- Apr, 2026 -
C, C++
National Institute of Information Technology
Experience
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Children's Medical Research Institute
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Australia
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Bioinformatics Scientist
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Jun 2023 - Present
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Australia
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UNSW
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Sydney, New South Wales, Australia
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Postdoctoral Researcher
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Apr 2020 - Jun 2023
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Sydney, New South Wales, Australia
Worked as a postdoc in a multidisciplinary team to determine the structure-function relationships of regulatory RNAs and their mechanisms of action using NGS and genomics. I investigated the multipronged role played by lncRNAs in genome organization and dynamics without which the complete understanding of genome regulation of higher organism remains elusive.
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Jawaharlal Nehru University
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New Delhi Area, India
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PhD Scholar, School of Computational and Integrative Sciences
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Jan 2016 - Feb 2020
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New Delhi Area, India
I investigated the role of macromolecular crowding and their properties such as size, shape and mobility on the dynamics of DNA binding proteins to reach their target DNA site. By using large scale Langevin dynamics simulations and extensive kinetic studies, I work to elucidate the role of cellular crowding on the target search dynamics of various transcription factors and DNA Repair Proteins.Macromolecular crowding affects various biological equilibria, such as protein folding, binding of small molecules, enzymatic activity, protein-protein interactions, pathological protein aggregation and the extent of amyloid formation etc. Hence, it will be beneficial in the treatment of conditions such as Alzheimer's disease and play a major role in genome editing and designing of artificial DNA Binding Proteins.
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Indian Institute of Technology, Guwahati
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Guwahati Area, India
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Junior Research Fellow, Department of Bioscience and Bioengineering
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Jul 2015 - Dec 2015
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Guwahati Area, India
I worked as a Junior Research Fellow on the project entitled 'A Novel Cas2 protein of CRISPR/Cas system in Leptospira interrogans displaying Dual Nuclease Activity'. Here, I worked to understand Cas2 diversity existing in the prokaryotic adaptive immune system. During this period, I worked on various molecular biology techniques such as Isolation of DNA, RNA, cloning and expression of bacterial genes.
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Education
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2016 - 2020Jawaharlal Nehru University
Doctor of Philosophy - PhD, Computational Biology and Bioinformatics -
2013 - 2015
University of Hyderabad
Master of Technology (M.Tech.), Bioinformatics -
2009 - 2013
Dr M G R Educational and Research Institute
Bachelor of Technology (B.Tech), Biotechnology -
2006 - 2008
Cotton College
H.S, PHYSICAL SCIENCES
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