Zach Augenfeld, PhD

Senior Scientific Software Engineer at Ganymede
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Contact Information
us****@****om
(386) 825-5501
Location
Philadelphia, Pennsylvania, United States, US

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Anthony Agnello

I had the pleasure of working with Zach at Eventide. Zach has a rare combination of enthusiasm and level-headedness. Zach is smart and diligent with excellent communication skills. He would be a great addition to any team.

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Experience

    • United States
    • Software Development
    • 1 - 100 Employee
    • Senior Scientific Software Engineer
      • Aug 2023 - Present

    • Biotechnology Research
    • 1 - 100 Employee
    • Senior Systems Engineer
      • Sep 2022 - Jul 2023

    • United States
    • Biotechnology Research
    • 1 - 100 Employee
    • Senior Systems Engineer
      • Sep 2021 - Sep 2022

    • United States
    • Higher Education
    • 700 & Above Employee
    • Graduate Student Research Assistant
      • Sep 2014 - May 2020

      • Developed first ever real-time automated multimodal registration framework to guide transcatheter arterial chemoembolization (TACE) by aligning MRIs to cone-beam CT images • Collaborated directly with oncologists and interventional radiologists to train convolutional neural networks (CNNs) to perform liver and tumor segmentation (classification) in multiple modalities • Trained and tested U-Nets, GANs, and STNs to benchmark segmentation, image synthesis, and registration • Extensive use of data augmentation, domain adaptation, and transfer learning Show less

    • United States
    • Software Development
    • 1 - 100 Employee
    • Firmware / Electronics Engineer
      • Jun 2011 - Aug 2013

      • Developed PWM pump controller for embedded FDA-compliant left ventricular assist device • Implemented FPGA-based beamfocusing control system for scanning electron microscope • Upgraded 68HC11-based magnetic flow process control devices to utilize ARM microcontrollers • Developed PWM pump controller for embedded FDA-compliant left ventricular assist device • Implemented FPGA-based beamfocusing control system for scanning electron microscope • Upgraded 68HC11-based magnetic flow process control devices to utilize ARM microcontrollers

    • United States
    • Music
    • 1 - 100 Employee
    • DSP / Software Engineer
      • Nov 2007 - Jan 2009

      • Optimized audio effects algorithms in DSP assembly and proprietary design software • Implemented USB/IEEE 1394/MIDI interface for cross-platform update utility application • Designed and built automated testing system used for audio diagnostics and quality control • Tested and fixed bugs in multi-platform Pro Tools TDM plug-ins • Optimized audio effects algorithms in DSP assembly and proprietary design software • Implemented USB/IEEE 1394/MIDI interface for cross-platform update utility application • Designed and built automated testing system used for audio diagnostics and quality control • Tested and fixed bugs in multi-platform Pro Tools TDM plug-ins

    • United States
    • Higher Education
    • 700 & Above Employee
    • Computer Help Desk Manager
      • Sep 2004 - Nov 2007

      • Started as a consultant resolving computer problems over the phone and on-site • Promoted to manager in 2006 to supervise, train, and prepare staff of 15 consultants for on-site computer maintenance appointments • Started as a consultant resolving computer problems over the phone and on-site • Promoted to manager in 2006 to supervise, train, and prepare staff of 15 consultants for on-site computer maintenance appointments

Education

  • Yale University
    Doctor of Philosophy (PhD), Biomedical Engineering
  • New York University - Polytechnic School of Engineering
    Master of Science - MS, Electrical Engineering
  • Brown University
    Bachelor of Science - BS, Electrical Engineering
  • Brooklyn Technical High School
    Electrical & Electronics Engineering Major

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