Yu Fan
Bioinformatician at National Cancer Institute (NCI)- Claim this Profile
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Bio
Experience
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National Cancer Institute (NCI)
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United States
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Research Services
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700 & Above Employee
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Bioinformatician
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Oct 2016 - Present
Customized and conducted NGS and clinical data analysis pipelines: RNA-Seq differential expression, gene pathway/network, gene fusion, ChIP-Seq, survival analyses, etc. Customized and conducted NGS and clinical data analysis pipelines: RNA-Seq differential expression, gene pathway/network, gene fusion, ChIP-Seq, survival analyses, etc.
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Bioinformatics Intern
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Jun 2016 - Oct 2016
Assisted NGS QC pipeline and visualization/annotation tool/platform development. Assisted NGS QC pipeline and visualization/annotation tool/platform development.
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The George Washington University
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United States
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Higher Education
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700 & Above Employee
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Research Assistant
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Oct 2014 - Jun 2016
Conducted research on glycoproteome pan-cancer analysis using customized Python scripts and software/tools; analyzed human cancer genomic data from public databases (TCGA, ICGC, IntOGen, COSMIC, dbSNP, etc.); Collected information from publications for glycobiologists. Reviewed publications and performed manual curation about cancer-related mutation and expression information for BioXpress, BioMuta databases in HIVE (High-performance Integrated Virtual Environment)… Show more Conducted research on glycoproteome pan-cancer analysis using customized Python scripts and software/tools; analyzed human cancer genomic data from public databases (TCGA, ICGC, IntOGen, COSMIC, dbSNP, etc.); Collected information from publications for glycobiologists. Reviewed publications and performed manual curation about cancer-related mutation and expression information for BioXpress, BioMuta databases in HIVE (High-performance Integrated Virtual Environment) (https://hive.biochemistry.gwu.edu/dna.cgi?cmd=main) Tested software/tools in HIVE and helped with tutorial/documentation Show less Conducted research on glycoproteome pan-cancer analysis using customized Python scripts and software/tools; analyzed human cancer genomic data from public databases (TCGA, ICGC, IntOGen, COSMIC, dbSNP, etc.); Collected information from publications for glycobiologists. Reviewed publications and performed manual curation about cancer-related mutation and expression information for BioXpress, BioMuta databases in HIVE (High-performance Integrated Virtual Environment)… Show more Conducted research on glycoproteome pan-cancer analysis using customized Python scripts and software/tools; analyzed human cancer genomic data from public databases (TCGA, ICGC, IntOGen, COSMIC, dbSNP, etc.); Collected information from publications for glycobiologists. Reviewed publications and performed manual curation about cancer-related mutation and expression information for BioXpress, BioMuta databases in HIVE (High-performance Integrated Virtual Environment) (https://hive.biochemistry.gwu.edu/dna.cgi?cmd=main) Tested software/tools in HIVE and helped with tutorial/documentation Show less
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Teaching Assistant
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Sep 2015 - May 2016
Assisted three Biochemistry/Bioinformatics courses. Provided one-to-one tutorial. Assisted three Biochemistry/Bioinformatics courses. Provided one-to-one tutorial.
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Education
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The George Washington University
Master’s Degree, Bioinformatics