Experience

National Institute of Allergy and Infectious Diseases (NIAID)

• United States
• Government Administration
• 700 & Above Employee

• Bioinformatics Analyst

  • Jun 2021 - Present

  Develop and maintain automated analysis pipeline for high throughput genomic sequencing data for NIAID clinical sequencing program . Conduct analysis on clinical in-house variants data for rare diseases. Develop and maintain automated analysis pipeline for high throughput genomic sequencing data for NIAID clinical sequencing program . Conduct analysis on clinical in-house variants data for rare diseases.



Cai Lab

• University of Michigan

• Graduate Bioinformatics Research Assistant

  • Nov 2019 - May 2021

  • Investigated high throughput single-cell transcriptomic data to determine neural gene expression patterns in Drosophila with command line and Python code. • Applied high dimensional data analysis and machine learning techniques to identify pseudotime gene expression patterns on neuroblast single-cell RNA sequencing data. • Incorporated and tailored a suitable methodology for current project by reading primary literature. • Co-authorship on a manuscript ‘The molecular landscape of… Show more • Investigated high throughput single-cell transcriptomic data to determine neural gene expression patterns in Drosophila with command line and Python code. • Applied high dimensional data analysis and machine learning techniques to identify pseudotime gene expression patterns on neuroblast single-cell RNA sequencing data. • Incorporated and tailored a suitable methodology for current project by reading primary literature. • Co-authorship on a manuscript ‘The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and a multi-informatic analysis paradigm’. Show less • Investigated high throughput single-cell transcriptomic data to determine neural gene expression patterns in Drosophila with command line and Python code. • Applied high dimensional data analysis and machine learning techniques to identify pseudotime gene expression patterns on neuroblast single-cell RNA sequencing data. • Incorporated and tailored a suitable methodology for current project by reading primary literature. • Co-authorship on a manuscript ‘The molecular landscape of… Show more • Investigated high throughput single-cell transcriptomic data to determine neural gene expression patterns in Drosophila with command line and Python code. • Applied high dimensional data analysis and machine learning techniques to identify pseudotime gene expression patterns on neuroblast single-cell RNA sequencing data. • Incorporated and tailored a suitable methodology for current project by reading primary literature. • Co-authorship on a manuscript ‘The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and a multi-informatic analysis paradigm’. Show less



MicroPort

• Medical Equipment Manufacturing
• 200 - 300 Employee

• Clinical Data Analyst (Intern)

  • Jul 2019 - Aug 2019

  I performed sub-group analysis on clinical trial data for TAVI products. I also conducted funnel and forest graphs for collected clinical report papers to generate historical results on end-point events for comparison. I compared first and second-generation TAVI products’ performance by conducting statistical tests, such as propensity score matching. All analysis is performed and presented on R and Python. I performed sub-group analysis on clinical trial data for TAVI products. I also conducted funnel and forest graphs for collected clinical report papers to generate historical results on end-point events for comparison. I compared first and second-generation TAVI products’ performance by conducting statistical tests, such as propensity score matching. All analysis is performed and presented on R and Python.



Brain and Memory lab

• University of Oregon

• Undergraduate Research Assistant

  • Nov 2017 - Jun 2019

  • Created Matlab based images and compiled several cognition tasks for human participated memory related cognition research. • Performed post-hoc statistical analysis on human cognitive data from 183 participants with SAS and successfully demonstrated a three-way-interaction result. • Poster presentation during University of Oregon Undergraduate Research Symposium. • Created Matlab based images and compiled several cognition tasks for human participated memory related cognition research. • Performed post-hoc statistical analysis on human cognitive data from 183 participants with SAS and successfully demonstrated a three-way-interaction result. • Poster presentation during University of Oregon Undergraduate Research Symposium.



Streisfeld lab

• Univeristy of Oregon

• Undergraduate Research Assistant

  • Sep 2017 - Jun 2019

  • Extracted DNA/RNA from batches of leaf sample with organic chemicals or commercial-ready extraction kits. • Genotyped plates of purified DNA samples on a large scale with PCR and gel electrophoresis which allows for DNA level expression comparison. • Tested hypothesis on evolutionary benefits from allele change with allele alignment test and Blast. • Extracted DNA/RNA from batches of leaf sample with organic chemicals or commercial-ready extraction kits. • Genotyped plates of purified DNA samples on a large scale with PCR and gel electrophoresis which allows for DNA level expression comparison. • Tested hypothesis on evolutionary benefits from allele change with allele alignment test and Blast.



SUPER Chem

• University of Oregon

• Chemistry Tutor Team Leader

  • Sep 2016 - Jun 2019

  · Leaded weekly meetings and was responsible for team communication and bonding. · Helped first-year undergraduates accustom to college life as well as emotional support for all clients. · Provided professional academic assistant by assessing students’ knowledge level and providing corresponding suggestions. · Leaded weekly meetings and was responsible for team communication and bonding. · Helped first-year undergraduates accustom to college life as well as emotional support for all clients. · Provided professional academic assistant by assessing students’ knowledge level and providing corresponding suggestions.