Sumir Panji

Network Manager at H3ABioNet
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City of Cape Town, Western Cape, South Africa, ZA

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Experience

    • South Africa
    • Research Services
    • 1 - 100 Employee
    • Network Manager
      • Jan 2013 - Present

      Project management and part coordination of the H3Africa Pan-African Bioinformatics Network (H3ABioNet) consisting of 28 partner Institutions in 14 African countries aimed at developing bioinformatics capacity and infrastructure within Africa while providing bioinformatics support to the joint NIH and Wellcome Trust funded H3Africa Initiative. Project management and part coordination of the H3Africa Pan-African Bioinformatics Network (H3ABioNet) consisting of 28 partner Institutions in 14 African countries aimed at developing bioinformatics capacity and infrastructure within Africa while providing bioinformatics support to the joint NIH and Wellcome Trust funded H3Africa Initiative.

    • Research Services
    • 1 - 100 Employee
    • PostDoctoral Researcher
      • Mar 2010 - Dec 2012

      Involved in statistical analysis of large scale gene expression data, genome annotation and Transposable Element repeat classification of parasitic vectors. Created genomic pipelines and workflows utilizing HPC for the analysis of newly sequenced genomes. Involved in statistical analysis of large scale gene expression data, genome annotation and Transposable Element repeat classification of parasitic vectors. Created genomic pipelines and workflows utilizing HPC for the analysis of newly sequenced genomes.

    • SSABMI PhD Fellow
      • Apr 2006 - Dec 2009

      Completed my PhD in Bioinformatics which identified and examined the intersection between positive Darwinian selection and bacterial virulence genes using microbial whole genomes, statistical methods and pathway analyses. Completed my PhD in Bioinformatics which identified and examined the intersection between positive Darwinian selection and bacterial virulence genes using microbial whole genomes, statistical methods and pathway analyses.

Education

  • University of the Western Cape
    PhD Bioinformatics, Pathogen Genomics, Positive Selection, Statistical Analysis
    2006 - 2009
  • University of the Western Cape/Universiteit van Wes-Kaapland
    MSc Bioinformatics (Cum laude), Bioinformatics, Cancer Genomics, Comparative Genomics
    2003 - 2005
  • University of Bristol
    Bachelor of Science (Joint Hons.), Pathology and Microbiology
    1997 - 2000

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