Sangjin Lee

Senior Bioinformatics Scientist at PacBio
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Contact Information
us****@****om
(386) 825-5501
Location
Greater Cambridge Area, UK
Languages
  • English Native or bilingual proficiency
  • Korean Native or bilingual proficiency
  • Chinese Limited working proficiency

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Credentials

  • 6.86x: Machine Learning with Python-From Linear Models to Deep Learning
    edX
    Dec, 2021
    - Nov, 2024
  • 18.02.1x: Multivariable Calculus 1: Vectors and Derivatives
    edX
    Oct, 2021
    - Nov, 2024
  • 18.6501x: Fundamentals of Statistics
    edX
    Sep, 2021
    - Nov, 2024
  • STAT110x: Introduction to Probability
    edX
    May, 2021
    - Nov, 2024
  • AI For Everyone
    Coursera
    Mar, 2019
    - Nov, 2024
  • Introduction to TensorFlow for Artificial Intelligence, Machine Learning, and Deep Learning
    Coursera
    Mar, 2019
    - Nov, 2024

Experience

  • PacBio
    • United States
    • Biotechnology
    • 400 - 500 Employee
    • Senior Bioinformatics Scientist
      • Jul 2023 - Present

  • Wellcome Sanger Institute
    • United Kingdom
    • Research Services
    • 700 & Above Employee
    • PhD student
      • Oct 2018 - Jul 2023

      Project : Single molecule mutation detection Supervisors: Peter Campbell and Richard Durbin I am developing methods to detect somatic mutations from normal tissues using CCS reads and genomic changes resulting from meiotic and mitotic recombination to understand mechanism that generates genetic diversity and loss of heterozygosity in gametes and somatic cells, respectively. Project : Single molecule mutation detection Supervisors: Peter Campbell and Richard Durbin I am developing methods to detect somatic mutations from normal tissues using CCS reads and genomic changes resulting from meiotic and mitotic recombination to understand mechanism that generates genetic diversity and loss of heterozygosity in gametes and somatic cells, respectively.

  • Macrogen Inc.
    • South Korea
    • Biotechnology Research
    • 1 - 100 Employee
    • Bioinformatician
      • Jan 2015 - Mar 2018

      - led and managed the second phase of the Korean Genome Project (3 million dollar project) and supervised two bioinformaticians. - independently organized collaboration with Erez Lieberman Aiden and Olga Dudchenko at Baylor College of Medicine for the Korean Genome Project. - constructed chromsome-length scaffolds of the Korean human genome using single molecule real time sequencing from Pacific Biosciences, optical mapping from BioNano Genomics and high-throughput chromatin conformation capture sequencing. - designed and developed bioinformatics pipeline for assembly-based identification and characterization of structural variations that could not be detected with Illumina short reads. - identified and characterized non-repetitive and non-reference insertions unique to North East Asian population. Show less

Education

  • University of Cambridge
    Doctor of Philosophy - PhD in Bioinformatics
    2018 - 2022
  • Cambridge Judge Business School
    EnterpriseTECH STAR
    2022 - 2022
  • Cambridge Judge Business School
    EnterpriseTech Postgraudate Programme
    2020 - 2021
  • University of Cambridge
    Master of Philosophy (MPhil), Computational Biology
    2013 - 2014
  • Imperial College London
    Bachelor of Science (B.S.), Biochemistry
    2010 - 2013
  • UWC South East Asia
    International Baccalaureate Diploma
    2008 - 2010

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