Experience

CyVerse.Org

• United States
• Biotechnology Research
• 1 - 100 Employee

• Scientific Analyst

  • Nov 2010 - Sep 2016

  BIO5, UNIVERSITY OF ARIZONA, TUCSON, AZ Informatics focused on studies to link genotypes to phenotypes in diverse species, but encompassing a very broad base of scientific data analysis tools. Software was developed for running in Linux systems, and used largely bash and perl. We built tools for web-based data analysis system, and virtual machine images for command line analysis workflows. We worked with APIs for building HPC analysis tools, and used Docker for deploying many of our general analysis tools. My work required the… Show more Informatics focused on studies to link genotypes to phenotypes in diverse species, but encompassing a very broad base of scientific data analysis tools. Software was developed for running in Linux systems, and used largely bash and perl. We built tools for web-based data analysis system, and virtual machine images for command line analysis workflows. We worked with APIs for building HPC analysis tools, and used Docker for deploying many of our general analysis tools. My work required the ability to lead development within the realm of computer software, but also an in-depth knowledge of the biological/genomic applications and the statistical questions that underlie an analytical workflow. Show less



University of Arizona

• United States
• Higher Education
• 700 & Above Employee

• Bioinformatics Analyst

  • Oct 2009 - Nov 2010

  BIO5/University of Arizona. Bioinformatics related to genome sequencing and assembly, RNASeq. Software development. The Plantagora project.



University of Arizona

• United States
• Higher Education
• 700 & Above Employee

• Assistant Research Scientist

  • Jul 2003 - Aug 2009

  Research in genomics, systems biology, and cell biology in both mammalian and plant systems.



Neose Technologies

• Biotechnology
• 1 - 100 Employee

• Manager, Cell Biology

  • Jun 1993 - Jan 2002

  Horsham, PA Research and drug development for respiratory and oral anti-infectives. Addiditonal work towards development of new manufacturing methods. Work focused primarily on oligosaccharide compounds.