Piotr Rotkiewicz

Senior Software Engineer at CoreMap
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Contact Information
us****@****om
(386) 825-5501
Location
Wilmington, Massachusetts, United States, US
Languages
  • English -
  • Polish -

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Adrian Arakaki

Piotr has talents I have never seen all combined in the same person; he is a smart and knowledgeable bioscientist, an expert computer programmer, a superb graphic designer, a professional (micro)photographer and most importantly, an exceptionally humble a pleasant person.

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Experience

    • United States
    • Medical Device
    • 1 - 100 Employee
    • Senior Software Engineer
      • Jan 2021 - Present
    • United States
    • Financial Services
    • Principal Software Engineer
      • Aug 2022 - Oct 2022
    • Canada
    • IT Services and IT Consulting
    • 700 & Above Employee
    • Project Manager and Principal Software Architect
      • Jan 2018 - Jan 2021

      Managed development of 3D visualization and molecular modeling suite. Managed development of 3D visualization and molecular modeling suite.

    • France
    • Artists and Writers
    • Product Manager
      • Oct 2016 - Dec 2017

      Product manager of PyMOL, one of the most popular molecular visualization programs.

    • Principal Scientist
      • Oct 2008 - Dec 2017

      Development of Maestro, Schrodinger's leading molecular modeling front end. Responsible for significant improvements of graphics capabilities over the years, as well as development of bioinformatics / sequence analysis components.

    • Nanotechnology Research
    • Multi-Disciplinary Software Engineer
      • Feb 2008 - Sep 2008

      Developed visualization methods for DNA and protein structures in molecular CAD program NanoEngineer-1. Led protein design front-end implementation project. Developed visualization methods for DNA and protein structures in molecular CAD program NanoEngineer-1. Led protein design front-end implementation project.

    • Postdoctoral researcher
      • Dec 2005 - Feb 2008

      Developed software and web service for systematic analysis of conformational changes in protein families. Developed software and web service for systematic analysis of conformational changes in protein families.

    • United States
    • Higher Education
    • 1 - 100 Employee
    • Postdoctoral associate
      • Jan 2003 - Nov 2005

      Developed metabolomics and text-mining based framework for prediction of druggable targets. Developed protein modeling software (side chain placement, model refinement, structural alignment, contact map analysis). Developed metabolomics and text-mining based framework for prediction of druggable targets. Developed protein modeling software (side chain placement, model refinement, structural alignment, contact map analysis).

    • Staff scientist
      • Apr 2001 - Mar 2002

      Developed in-house protein structure prediction tools and associated visualization programs. Developed in-house protein structure prediction tools and associated visualization programs.

    • United States
    • Biotechnology Research
    • 300 - 400 Employee
    • Visiting graduate student
      • 1999 - 2000

      Member of bioinformatics group at Donald Danforth Plant Science Center / Washington University, St. Louis, MO. Developed protein structure prediction tools and molecular visualization software. Participated in CASP. Member of bioinformatics group at Donald Danforth Plant Science Center / Washington University, St. Louis, MO. Developed protein structure prediction tools and molecular visualization software. Participated in CASP.

    • Visiting graduate student
      • 1997 - 1998

      Protein structure prediction group at TSRI. Developed knowledge-based potentials for protein structure prediction. Participated in CASP. Protein structure prediction group at TSRI. Developed knowledge-based potentials for protein structure prediction. Participated in CASP.

Education

  • University of Warsaw
    PhD, Chemistry, Bioinformatics
    1998 - 2002
  • University of Warsaw
    MSc, Chemistry, Computer science (MISMaP)
    1993 - 1998
  • Krajowy Fundusz na rzecz Dzieci
    Theoretical Chemistry, Computer Simulations
    1990 - 1993

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