Monika Pradhan, Ph.D.

Scientist II at Sonata Therapeutics
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Contact Information
Location
Greater Boston
Languages
  • English Native or bilingual proficiency
  • Nepali Native or bilingual proficiency
  • Hindi Native or bilingual proficiency

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Experience

    • United States
    • Biotechnology Research
    • 1 - 100 Employee
    • Scientist II
      • Jul 2022 - Present
    • United States
    • Hospitals and Health Care
    • 300 - 400 Employee
    • Postdoctoral Research Fellow
      • Apr 2019 - Oct 2021

      • Managed projects and collaborated with researchers, conducting live or virtual meetings and data presentations; guide the project by adapting to the changes demanded by the results. • Optimized protocols for tumor/ lung tissue dissociation, cryopreservation, and cell sorting to process for single-cell RNA sequencing enabling successful preservation of valuable human clinical trial/ mouse experiment samples that led to massive cost reduction for sequencing. • Designed and lead in… Show more • Managed projects and collaborated with researchers, conducting live or virtual meetings and data presentations; guide the project by adapting to the changes demanded by the results. • Optimized protocols for tumor/ lung tissue dissociation, cryopreservation, and cell sorting to process for single-cell RNA sequencing enabling successful preservation of valuable human clinical trial/ mouse experiment samples that led to massive cost reduction for sequencing. • Designed and lead in vivo mice study to track tumor growth reduction, lower lung metastases frequency, and prolonged survival which led to successful identification of antibody-based therapies (immune checkpoint inhibitors) that worked best in treating Non-small cell lung cancer mouse model. • Developed a 34 color antibody panel for flow cytometry analysis (Cytek Aurora) that was used to phenotype major immune components infiltrating mouse tumor-associated with response and resistance to immunotherapy-based treatments. • Designed and performed experiments utilizing flow cytometry, immunohistochemistry, RTPCR, in vivo immune cell depletion study, bulk- and single cell- RNA sequencing that led to the exploration of mechanistic aspects of response and resistance to immunotherapy based-treatments in lung cancer mouse model. • Extensive reading and writing of the latest scientific literature that resulted in manuscripts for publication and grant proposals of future research. • Efficiently managed a young lab by establishing animal research protocols, upholding health and safety protocols, maintaining equipment/software, training assistants, studying marketplace/ building connections with vendors leading to proper utilization of lab startup fund and smooth lab operations. • Systematically organized phase II clinical trial fresh tissue retrieval for critical processing and preservation and maintained clinical trial DNA/RNA sample inventory. Show less • Managed projects and collaborated with researchers, conducting live or virtual meetings and data presentations; guide the project by adapting to the changes demanded by the results. • Optimized protocols for tumor/ lung tissue dissociation, cryopreservation, and cell sorting to process for single-cell RNA sequencing enabling successful preservation of valuable human clinical trial/ mouse experiment samples that led to massive cost reduction for sequencing. • Designed and lead in… Show more • Managed projects and collaborated with researchers, conducting live or virtual meetings and data presentations; guide the project by adapting to the changes demanded by the results. • Optimized protocols for tumor/ lung tissue dissociation, cryopreservation, and cell sorting to process for single-cell RNA sequencing enabling successful preservation of valuable human clinical trial/ mouse experiment samples that led to massive cost reduction for sequencing. • Designed and lead in vivo mice study to track tumor growth reduction, lower lung metastases frequency, and prolonged survival which led to successful identification of antibody-based therapies (immune checkpoint inhibitors) that worked best in treating Non-small cell lung cancer mouse model. • Developed a 34 color antibody panel for flow cytometry analysis (Cytek Aurora) that was used to phenotype major immune components infiltrating mouse tumor-associated with response and resistance to immunotherapy-based treatments. • Designed and performed experiments utilizing flow cytometry, immunohistochemistry, RTPCR, in vivo immune cell depletion study, bulk- and single cell- RNA sequencing that led to the exploration of mechanistic aspects of response and resistance to immunotherapy based-treatments in lung cancer mouse model. • Extensive reading and writing of the latest scientific literature that resulted in manuscripts for publication and grant proposals of future research. • Efficiently managed a young lab by establishing animal research protocols, upholding health and safety protocols, maintaining equipment/software, training assistants, studying marketplace/ building connections with vendors leading to proper utilization of lab startup fund and smooth lab operations. • Systematically organized phase II clinical trial fresh tissue retrieval for critical processing and preservation and maintained clinical trial DNA/RNA sample inventory. Show less

    • United States
    • Higher Education
    • 700 & Above Employee
    • Research Fellow
      • Aug 2018 - Mar 2019

    • Graduate Student (Research experience)
      • Sep 2013 - Aug 2018

      • Engineered amino acid substitution mutations in the protein coding DNA sequence. Transformed the newly created mutant plasmid in Escherichia coli cells and expressed protein. Purified the protein tagged with six-Histidine residues in the C-terminal region using Talon (Co++) resin by affinity based column chromatography. • Subjected the proteins to mechanistic studies involving enzymatic assays to test protein encoded endonuclease activity, reverse transcriptase activity and target DNA/RNA… Show more • Engineered amino acid substitution mutations in the protein coding DNA sequence. Transformed the newly created mutant plasmid in Escherichia coli cells and expressed protein. Purified the protein tagged with six-Histidine residues in the C-terminal region using Talon (Co++) resin by affinity based column chromatography. • Subjected the proteins to mechanistic studies involving enzymatic assays to test protein encoded endonuclease activity, reverse transcriptase activity and target DNA/RNA binding ability. Visualized results using polyacrylamide Electrophoretic mobility shift assay (EMSA) and urea Denaturing gel. • Constructed and analyzed a homology based 3D model of the protein using bioinformatics tool. • Designed primers and oligo, used PCR and annealing method to construct double stranded and holiday junction DNA. Radiolabeled the DNA constructs with Phosphorus-32 (32P) isotope. • Optimized IPTG induced recombinant protein expression protocol and affinity chromatography based protein purification protocol to enhance the protein yield. • Gained expertise in managing multiple research projects involving research plan development, literature review, design & execution of experiments, optimization of protocols, data analysis; and participate in writing grant proposals and manuscripts. • Experience in laboratory inventory management and budgeting by taking responsibility for lab reagents ordering; material storage; and proper disposal of dangerous chemicals including radioactive materials • Served as a mentor to four graduate students and two undergraduate students providing training for research work • Maintenance and troubleshooting of lab equipment and training new users from different departments • Experience of wet laboratory systems including radiation handling station, and fume hood • 1 article in peer-reviewed journal and co-author of five oral and poster presentations

    • Graduate Teaching Assistant
      • Aug 2013 - May 2018

      • Instructed undergraduate Cell and Molecular Biology labs, evaluated lab reports, quizzes and final exams • Demonstrated experiments and explained principles behind them • Supervised all laboratory activities

    • Pharmacist-In-charge
      • Feb 2012 - Jun 2013

      • One to one interaction with patients to go over all prescribed medications, educate patients on the role of each medication in their regimen, and emphasize the importance of adherence for a better outcome. • Supervision of daily management of pharmacy and delegate staff responsibilities. • Establishment and supervision of record keeping system for purchase, sale, delivery, and storage of pharmaceuticals. • Monitored and maintained inventory. • Supervision of all aspects of the… Show more • One to one interaction with patients to go over all prescribed medications, educate patients on the role of each medication in their regimen, and emphasize the importance of adherence for a better outcome. • Supervision of daily management of pharmacy and delegate staff responsibilities. • Establishment and supervision of record keeping system for purchase, sale, delivery, and storage of pharmaceuticals. • Monitored and maintained inventory. • Supervision of all aspects of the operation. Show less • One to one interaction with patients to go over all prescribed medications, educate patients on the role of each medication in their regimen, and emphasize the importance of adherence for a better outcome. • Supervision of daily management of pharmacy and delegate staff responsibilities. • Establishment and supervision of record keeping system for purchase, sale, delivery, and storage of pharmaceuticals. • Monitored and maintained inventory. • Supervision of all aspects of the… Show more • One to one interaction with patients to go over all prescribed medications, educate patients on the role of each medication in their regimen, and emphasize the importance of adherence for a better outcome. • Supervision of daily management of pharmacy and delegate staff responsibilities. • Establishment and supervision of record keeping system for purchase, sale, delivery, and storage of pharmaceuticals. • Monitored and maintained inventory. • Supervision of all aspects of the operation. Show less

Education

  • The University of Texas at Arlington
    Doctor of Philosophy - Ph.D., Quantitative Biology (Genome Biology) Specialization- Biochemistry and Molecular Biology
    2013 - 2018
  • School of Health and Allied Sciences, Pokhara University
    Bachelor's degree, Pharmaceutical Sciences
    2007 - 2011

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