Experience

Frederick National Laboratory for Cancer Research

• United States
• Biotechnology Research
• 400 - 500 Employee

• Data Analyst III

  • Mar 2022 - Present

  Data analysis for proteomics cancer research. Develop software. Data analysis for proteomics cancer research. Develop software.



The Johns Hopkins University School of Medicine

• United States
• Hospitals and Health Care
• 700 & Above Employee

• Research Specialist II

  • Dec 2017 - May 2020

  1. Bioinformatics, Data Analysis and Visualization: • Analyzed proteomic and glyco-proteomic data using statistical and machine learning methods, including hypothesis testing, normalization, classification, clustering, and regression for cancer and HIV research. 2. Software Development for data analysis: • Develop software in Python to process mass spectrometry O-linked data, including signal processing, noise reduction, feature detection, and pattern recognition. This software is packed and published on Github (https://github.com/appleTree2017/Extraction-of-O-linked-glycopeptides-EXoO-). • Developed GPQuest, a search engine in Python for intact glycopeptide identification in tandem mass spectrometry (Website: https://www.biomarkercenter.org/gpquest). • Developed modules for data analysis and visualizations, including normalization, PCA, differentiation analysis, Hieratical clustering, Volcano plots. These modules were integrated into a data analysis pipeline named Omics One. 3. Website/Database Development: • Developed N-GlycositeAtlas: an online database resource for mass spectrometry-based human N-linked glycoprotein and glycosylation site mapping (Django App deployed on AWS). Website: https://www.biomarkercenter.org/nglycositeatlas • Developed, designed, and maintained the website for Center for Biomarkers Discovery and Translation, Analytical Chemistry Division, Johns Hopkins University. • Develop lab specimen storage and lab supplies ordering systems. Show less



The Johns Hopkins University School of Medicine

• United States
• Hospitals and Health Care
• 700 & Above Employee

• Research Program Coordinator

  • Mar 2014 - 2015

  • Project management for an HIV international clinical research site in China.• Document management and translation.

• Research Technologist

  • Jun 2012 - Mar 2014

  • Conducted hands-on experiments on biomarker discovery and validation for cancer research. • Analyzed data for mass spectrometry results.



University of Warwick

• United Kingdom
• Higher Education
• 700 & Above Employee

• Reaearch Technician

  • Nov 2008 - Jul 2011

  • Studied echovirus 7 entry mechanism by using inhibitory drugs and short inferring RNA (siRNA) to block specific component of endocytosis pathways. • Conducted experiments and reported results. • Studied echovirus 7 entry mechanism by using inhibitory drugs and short inferring RNA (siRNA) to block specific component of endocytosis pathways. • Conducted experiments and reported results.