Mauro Chavez

Senior Bioinformatics Scientist at Illumina
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Contact Information
us****@****om
(386) 825-5501
Location
San Diego, California, United States, US

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Experience

    • United States
    • Biotechnology Research
    • 700 & Above Employee
    • Senior Bioinformatics Scientist
      • Oct 2022 - Present

      San Diego, California, United States

    • Bioinformatics Scientist 1
      • Dec 2021 - Oct 2022

    • Associate Bioinformatics Scientist
      • Nov 2020 - Dec 2021

    • United States
    • IT Services and IT Consulting
    • 700 & Above Employee
    • Bioinformatics Software Developer @ Eli Lilly
      • Feb 2019 - Nov 2020

      Greater San Diego Area • Tools: Python, Django, Remote Development, AWS, Workflow Description Language, Galaxy • Architected and implemented NGS data analysis pipeline leveraging HPC cluster and submitting results to REST APIs • Lead developer of protein analysis pipeline which combined historical assay results with published and in-house models • Addressed issues of scale, complexity, and data presentation in both software and conceptual database schema design • Member of geographically diverse cross… Show more • Tools: Python, Django, Remote Development, AWS, Workflow Description Language, Galaxy • Architected and implemented NGS data analysis pipeline leveraging HPC cluster and submitting results to REST APIs • Lead developer of protein analysis pipeline which combined historical assay results with published and in-house models • Addressed issues of scale, complexity, and data presentation in both software and conceptual database schema design • Member of geographically diverse cross functional team including database admins, subject matter experts, and HPC group • Participated in agile software development, communicated with scientists (end users), gathered requirements and formulated technical software solutions, data models, and UI elements to advance next generation research capabilities Show less

    • Python Programmer
      • Jun 2016 - Dec 2018

      San Diego Work reference: Dr. Cedric Garland (UCSD) || (619) 980-2965 (ROYGBIV_Earth on GitHub) • Gathered requirements and managed scope of graphing application to aid in research and completed full stack development • Independently completed software development life cycle tasks, wrote documentation, and hosted user training • Maintained client’s trust that custom applications would provide long term value

    • Director
      • May 2015 - Feb 2016

      Greater San Diego Area • Occupied role where responsibilities extended to all levels of organization • Communicated with students and faculty to organize and facilitate event planning • Managed budget of student fees in order to make meaningful contributions to UCSD as a sustainable & energy responsible campus • Operated as organization representative during open office hours and directed students as to how they could use the resources we provide for them

    • Core Collective Member
      • Jan 2013 - Dec 2015

      Greater San Diego Area • Maintained leadership position in non-hierarchical ideologically diverse collective • Experienced importance of work distribution and critical relationships • Showed ability to disagree and commit to positions while remaining self-critical • Resolved conflict through negotiation and delicately criticized collective failures

    • Business Intern
      • May 2014 - Jul 2014

      Greater San Diego Area • Initiated business process improvement by implementing business contact database and calibrating medical devices on a daily basis • Professionally engaged with high profile patients as company representative • Managed a diverse range of responsibilities in order to maintain smooth operations

    • Research Lab Intern
      • May 2013 - Sep 2013

      Greater San Diego Area • Fostered research skills while gaining familiarity with investigative scientific process and requirements of lab work • Experienced the critical importance of following lab protocol as a detail oriented and patient member of a wet lab team • Demonstrated ability to escalate issues to supervisors, balancing self-reliant problem solving and taking up research time

Education

  • Johns Hopkins University Advanced Academic Programs
    Bioinformatics
    2020 - 2022
  • University of California, San Diego
    Bachelor's Degree, Bioinformatics, with Computer Science minor
    2014 - 2018
  • High Tech High
    2009 - 2014

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