Jean-François Taly

Head of Bioinformatics at METHYS DX
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Contact Information
us****@****om
(386) 825-5501
Location
Paris, Île-de-France, France, FR
Languages
  • French Native or bilingual proficiency
  • English Full professional proficiency
  • Catalan Limited working proficiency
  • Spanish Limited working proficiency

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Experience

    • France
    • Biotechnology
    • 1 - 100 Employee
    • Head of Bioinformatics
      • Jun 2023 - Present
    • France
    • Medical and Diagnostic Laboratories
    • 400 - 500 Employee
    • Head of Clinical Bioinformatics
      • Feb 2016 - Jun 2023

      Clinical sequencing data analysis Operational and scientific supervision of 4 bioinformaticians ISO15189 certification Close collaboration with geneticists and scientists Clinical sequencing data analysis Operational and scientific supervision of 4 bioinformaticians ISO15189 certification Close collaboration with geneticists and scientists

    • Bioinformatician
      • Feb 2015 - Jan 2016

      Metagenomics data analysis Galaxy server and tools development Bioinformatics support More details @ http://www.prabi.fr Metagenomics data analysis Galaxy server and tools development Bioinformatics support More details @ http://www.prabi.fr

    • Spain
    • Biotechnology Research
    • 200 - 300 Employee
    • Acting Head of the Bioinformatics Facility
      • Sep 2013 - Jan 2015

      Scientific supervision of 3 bioinformaticiansProjects and budget managementTutorials to the scientific communityDefine a strategy for new developments based on the institute needs

    • Core Facility Bioinformatician
      • Jul 2012 - Jan 2015

      Bioinformatic support in data analysis:+RNAseq differential expression+de novo Transcriptome assembly+SNPs calling+Motif discoveryDeploying a local instance of Galaxy:+Configuring Galaxy to the local infrastructure+Integrating bioinformatics tools developped in the institute+Prepare tutorials for users

    • Post-doctoral fellow
      • Jan 2009 - Jun 2012

      Multiple Sequence Alignment with the T-Coffee packageStructural bioinformaticsPhylogenyProteomics data analysis and cognate annotation transfer

    • Post doctoral fellow
      • Nov 2007 - Dec 2008

      Development of a gene annotation relational database and its graphical interface. Development of a gene annotation relational database and its graphical interface.

    • Laboratory Technician
      • Sep 2001 - Nov 2001

      Chemical analysis of wine samples. Chemical analysis of wine samples.

    • France
    • Research Services
    • 700 & Above Employee
    • Laboratory Technician
      • May 1999 - Jul 1999

      Protein purifications and bacterial cultures. Protein purifications and bacterial cultures.

Education

  • Université Denis Diderot (Paris VII)
    Ph.D, Genome Analysis and Molecular Modelling
    2003 - 2007
  • Université Denis Diderot (Paris VII)
    Master of Science (MSc), Genome analysis and molecular modeling
    2002 - 2003
  • Université Pierre et Marie Curie (Paris VI)
    Master, Biochemistry
    2000 - 2001

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