Experience

The Jackson Laboratory

• United States
• Biotechnology Research
• 700 & Above Employee

• Associate Professor

  • Oct 2019 - Present

  https://www.ucarlab.com/

• Assistant Professor

  • Sep 2013 - Present



Stanford University

• United States
• Higher Education
• 700 & Above Employee

• Postdoctoral Fellow

  • Sep 2010 - Sep 2013

  Development of computational techniques and tools to analyze large-scale and diverse datasets of aging and stem cell research. Development of computational techniques and tools to analyze large-scale and diverse datasets of aging and stem cell research.



University of Iowa

• United States
• Higher Education
• 700 & Above Employee

• NSF Computing Innovation Fellow

  • Sep 2009 - Sep 2010

  Analysis of next generation sequencing data (histone modification marks) for the discovery of functional annotations of human genome. Developed a scalable bi-clustering approach to identify combinatorial histone modification patterns from human ChIP-seq datasets. Explored the dynamics of protein interactions through the progression of prostate cancer by extending a framework developed for the analysis of temporal social networks. Analysis of next generation sequencing data (histone modification marks) for the discovery of functional annotations of human genome. Developed a scalable bi-clustering approach to identify combinatorial histone modification patterns from human ChIP-seq datasets. Explored the dynamics of protein interactions through the progression of prostate cancer by extending a framework developed for the analysis of temporal social networks.



The Ohio State University

• United States
• Higher Education
• 700 & Above Employee

• PHD Student

  • Sep 2003 - Aug 2009

  Data mIning and Network Biology Data mIning and Network Biology



DTU - Technical University of Denmark

• Denmark
• Research Services
• 700 & Above Employee

• Guest Researcher

  • Jan 2008 - Jul 2008

  Developed a framework to integrate evidence from diverse data sources, ChIP-chip, gene expression, nucleosome occupancy and Transcription Factor motif binding sites, to identify functional and non-functional protein-DNA interactions. Identified condition-specific regulatory pathways to exploit the response of cell machinery to various environmental stimuli [published in ISMB 2009]. Developed a framework to integrate evidence from diverse data sources, ChIP-chip, gene expression, nucleosome occupancy and Transcription Factor motif binding sites, to identify functional and non-functional protein-DNA interactions. Identified condition-specific regulatory pathways to exploit the response of cell machinery to various environmental stimuli [published in ISMB 2009].



Bristol Myers Squibb

• United States
• Pharmaceutical Manufacturing
• 700 & Above Employee

• Research Intern

  • Jun 2006 - Sep 2006

  Conducted research on the investigation of an alternative reciprocal approach for gene association network construction. Investigated a MANOVA-based model for gene set level hypothesis testing to elucidate biological response to HIV drug treatments [Published in Bioinformatics journal in 2007]. Conducted research on the investigation of an alternative reciprocal approach for gene association network construction. Investigated a MANOVA-based model for gene set level hypothesis testing to elucidate biological response to HIV drug treatments [Published in Bioinformatics journal in 2007].