Dipayan Samanta

PHD at South Dakota School of Mines and Technology
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Contact Information
us****@****om
(386) 825-5501
Location
Rapid City, South Dakota, United States, US
Languages
  • English Full professional proficiency
  • Hindi Full professional proficiency
  • Bengali Full professional proficiency
  • German Limited working proficiency

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Gadhamshetty Venkataramana

I have enjoyed watching Dipayan Samanta evolve as an expert in bioinformatics and computational biology during my tenure at SD Mines. I have noted his passion to achieve excellence in research with equal emphasis on work ethics. He has a strong aptitude for computational analysis and data interpretation. He has unwavering dedication to face and solve new challenges. His dedication to effective communication skills is also noteworthy. Some of his other impressive traits include his collaborative and supportive nature, ability to promote productive research environment, and desire to leave a lasting impact on the academic community. I am confident that Dipayan Samanta will be an ace employee at any work place.

Subhra Sankha Mukherjee

I have the utmost pleasure in recommending Dipayan Samanta for his outstanding achievements in the MTech/Ph.D Chemical Engineering program. His remarkable expertise in problem-solving and statistical analytics, coupled with their collaborative approach, proved invaluable to our team. I have no doubt he will thrive in the computational field, making a significant impact in the both industrial and academic settings. Wishing him all the very best !!

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Experience

    • United States
    • Higher Education
    • 400 - 500 Employee
    • PHD
      • May 2018 - Present

      (1) Published Methylosinus trichosporium OB3b genome with 98X coverage by implementing long-read Nanopore Sequencing (NGS) and reported 420 novel genes.(2) • Unveiled 2 novel AHL synthases in Desulfovibrio sp. using DECIPHER-package (R) based similarity analysis, homology protein modeling, molecular docking, and virtual screening (based on Python in Windows and LINUX environment).(3) Revealed 22 Novel Functional Proteins in methanotrophs with the aid of Pangenome Comparative Genomics Analysis Pipeline developed in Google Collab (LINUX environment) .(4) A Remarkable 42% Enhancement in pMMO Enzyme Activity was Achieved using Computational Molecular Modeling and Docking.(5) Collaborated in 7 interdisciplinary projects, engaging colleagues from different domains, and fostering a synergistic research environment.(6) Acquired practical laboratory skills in gene cloning, protein expression, and a wide range of analytical instruments (e.g., HPLC, PCR, ICP-MS).(7) Presented research findings at prestigious international conferences (AIChE), disseminated key discoveries to a global audience of experts. Show less

    • Graduate Teaching Assistant
      • Jan 2019 - Apr 2023

      (1) Responsible for guiding 16 students in the Biochemistry Lab, facilitating their understanding of essential biochemistry principles and techniques.(2) Led hands-on experiments exploring protein structure and function, enzymatic reactions, metabolic pathways, and molecular biology techniques.(3) Assisted students in data analysis, interpretation, and the preparation of comprehensive scientific reports.(4) Fostered an engaging and collaborative learning environment, encouraging active participation and curiosity in the lab. (5) Took a leadership role in a section of the Bioinformatics course, focusing on Advanced Protein Modeling and Molecular Docking.(6) Provided 54 students with theoretical and practical knowledge in bioinformatics, utilizing computational tools and software.(7) Guided students in predicting protein structures, studying protein-ligand interactions, and analyzing protein conformational changes. Show less

    • Master of Science
      • Aug 2018 - May 2022

      (1) Advanced Thermodynamics: Explored phase equilibria, chemical equilibria, and energy conversion processes in chemical engineering applications.(2) Advanced Reactor Design: Focused on designing and optimizing chemical reactors, analyzing reaction kinetics and engineering principles for enhanced performance.(3) Computational Transport Phenomena: Utilized computational techniques to study heat transfer, mass transfer, and fluid flow in chemical engineering systems.(3) Advanced Transport Processes: Investigated momentum transfer, heat transfer, and mass transfer in complex systems, emphasizing their relevance in chemical engineering.(4) Biochemical Engineering: Explored biochemical processes in chemical engineering, including enzyme kinetics, bioreactor design, and bioseparations.(5) Bio-separations: Examined techniques for biomolecule separation and purification in biotechnological processes, such as chromatography and extraction.(6) Renewable and Sustainable Energy: Studied principles and technologies related to renewable and sustainable energy sources like solar, wind, biomass, and fuel cells.(7) Optimization Techniques: Explored mathematical optimization methods to enhance efficiency and resource utilization in chemical engineering processes. Show less

    • India
    • Higher Education
    • 200 - 300 Employee
    • Engineering Student
      • Jul 2013 - May 2017

      (1) Computational Development of 1 Cancer Marker (CEACAM): Conducted a bioinformatics project focusing on human colorectal and lung cancer. Utilized in-silico methods to identify potential carcinoma and adenocarcinoma-associated markers, contributing to early detection and targeted therapies. (2) Molecular Dynamics using LAMMPS to understand the oligomerization state of alpha-synuclein responsible for Neurodegenerative Diseases: Undertook a bioinformatics investigation into Parkinson's disease. Employed molecular dynamics simulations to study alpha-synuclein oligomerization, gaining insights into the disease's underlying molecular mechanisms, which may aid in the development of therapeutic interventions. Show less

Education

  • South Dakota School of Mines and Technology
    Doctor of Philosophy - PhD, Computational Biology and Bioinformatics (Chemical and Biological Engineering)
    2018 - 2023
  • South Dakota Mines
    Master of Science - MS, GPA 3.6
    2020 - 2022
  • National Institute of Technology Durgapur
    Bachelor of Technology (B.Tech), Biotechnology
    2013 - 2017

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