Charles Lin
Senior Software Engineer at TandemAI- Claim this Profile
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English Native or bilingual proficiency
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Chinese Limited working proficiency
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Bio
Experience
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TandemAI
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United States
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Biotechnology Research
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1 - 100 Employee
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Senior Software Engineer
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Oct 2022 - Present
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Consultant
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Jul 2016 - Present
Wrote efficient GPU-accelerated parallel algorithms for Dart Neurosciences to boost Poisson-Boltzmann calculations (2016-2017) HPC Consultant for a VA Hospital (2021) Grant writer to a small startup (TocsTech) for an EPA SBIR grant (2021) Worked on a pandemic project (CTRL+V), a no-code NFT generator that could also deploy on several chains, which became a grant recipient (2021-2022) Wrote efficient GPU-accelerated parallel algorithms for Dart Neurosciences to boost Poisson-Boltzmann calculations (2016-2017) HPC Consultant for a VA Hospital (2021) Grant writer to a small startup (TocsTech) for an EPA SBIR grant (2021) Worked on a pandemic project (CTRL+V), a no-code NFT generator that could also deploy on several chains, which became a grant recipient (2021-2022)
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Roivant Sciences
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United States
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Biotechnology
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100 - 200 Employee
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Senior Investigator
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Mar 2021 - Aug 2022
Helped improve processes by up to 60% in computational screening throughput Helped improve accuracy of assessing binding properties by up to 20% Created novel visualization tools to accurately assess hotspots for compound during lead optimization Fixed fault tolerance in code bases to decrease failure rates by 99% by identifying and fixing crucial bugs Helped improve processes by up to 60% in computational screening throughput Helped improve accuracy of assessing binding properties by up to 20% Created novel visualization tools to accurately assess hotspots for compound during lead optimization Fixed fault tolerance in code bases to decrease failure rates by 99% by identifying and fixing crucial bugs
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Roivant Discovery
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United States
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Biotechnology Research
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1 - 100 Employee
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Senior Investigator
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Jan 2020 - Mar 2021
Same as previous title.Also explored using machine learning methods to accurately predict small molecules binding properties by utilizing voxel-based CNN calculations
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Investigator
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Sep 2018 - Jan 2020
Develop, implement, and optimize algorithms for drug discovery on CPU+GPUsMove Molecular Dynamics to next generation hardwares (FPGAs + newer CPU/GPU architectures)Develop and implement workflows that help drive drug discovery projectsImplemented and expanded on methodology to increase prediction of ligand binding off ratesCreate novel methodology and visualization tools to accurately assess small molecule properties
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GSK
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United Kingdom
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Pharmaceutical Manufacturing
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700 & Above Employee
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Intern / Graduate Student
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Apr 2017 - Aug 2018
Software development for high performance computing machines (GPU boxes, supercomputers, etc) Novel methodologies (Free energy calculations, protein binding, small molecule permeability) Software optimizations 1.) Work with Intel on CPU optimizations towards high/mid bin Intel Xeon/Xeon Phi processors for single and multi-thread (http://ambermd.org/intel/index.htm) 2.) Work on GPU acceleration (CUDA & a bit of ROCm) Software development for high performance computing machines (GPU boxes, supercomputers, etc) Novel methodologies (Free energy calculations, protein binding, small molecule permeability) Software optimizations 1.) Work with Intel on CPU optimizations towards high/mid bin Intel Xeon/Xeon Phi processors for single and multi-thread (http://ambermd.org/intel/index.htm) 2.) Work on GPU acceleration (CUDA & a bit of ROCm)
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San Diego Supercomputer Center
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United States
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IT Services and IT Consulting
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100 - 200 Employee
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Graduate Research Assistant - Programmer
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Jan 2015 - Mar 2017
Code optimization Methods Development Biomolecular Software Development Analysis of molecular systems IT Administration for Walker Lab Code optimization Methods Development Biomolecular Software Development Analysis of molecular systems IT Administration for Walker Lab
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