Experience

Nomic Bio

• Canada
• Biotechnology Research
• 1 - 100 Employee

• Lead Software Engineer

  • Jan 2022 - Present



T. Rowe Price

• United States
• Financial Services
• 700 & Above Employee

• Senior Software Engineer

  • Jul 2020 - Feb 2022



Symbiont

• United States
• Financial Services
• 1 - 100 Employee

• Senior Software Engineer

  • Sep 2019 - Jul 2020

  Tripping the blockchain fantastic Tripping the blockchain fantastic



Adaptive Management

• New York

• Senior Software Engineer

  • Jan 2018 - Sep 2019

  Angular, Python, PostgreSQL, EMR, Financial Modelling Full stack development Angular, Python, PostgreSQL, EMR, Financial Modelling Full stack development



Memorial Sloan Kettering Cancer Center

• United States
• Hospitals and Health Care
• 700 & Above Employee

• Data Engineering Manager

  • Jul 2015 - Jan 2019

  I developed a new portable analysis pipeline, suitable for internal HPC and cloud. I put up new infrastructure to support the analysis of 50,000 samples a year. I developed and implemented metadata and data storage techniques, along with search capabilities, to make all of the new data this system generates accessible and useful. I put up two intranet portals to service lab customers and data analysts. They also serve as the logical hub for all of the aforementioned services. I wrote portions of all the above, including backend, frontend, and database schemas. Show less



QIAGEN

• Netherlands
• Biotechnology Research
• 700 & Above Employee

• Senior Bioinformatics QA Engineer

  • Jan 2014 - Jul 2016

  I performed basic bioinformatics validation and support of customer data, corresponding with customers as required to ensure their mutations were correctly annotated . I also designed and validated bioinformatics pipelines for us with Ingenuity's Variant Analysis platform, validating basic workflows against the Genome in a Bottle dataset, and working with partners such as DNA Nexus to provide our product as a plugin or service within their frameworks. I performed basic bioinformatics validation and support of customer data, corresponding with customers as required to ensure their mutations were correctly annotated . I also designed and validated bioinformatics pipelines for us with Ingenuity's Variant Analysis platform, validating basic workflows against the Genome in a Bottle dataset, and working with partners such as DNA Nexus to provide our product as a plugin or service within their frameworks.



Bigelow Laboratory for Ocean Sciences

• Bioinformatics Engineer

  • Jan 2013 - Jan 2014

  I was the main bioinformatics engineer for the Single Cell Genomics Sequencing Core at Bigelow Laboratory for Ocean Sciences . I created end-to-end pipelines for single cell bacterial analysis. I provided computational support for genomics research on previously unsequenced ocean-dwelling bacteria, in an attempt to improve our understanding of carbon sequestration cycles and global warming. I was the main bioinformatics engineer for the Single Cell Genomics Sequencing Core at Bigelow Laboratory for Ocean Sciences . I created end-to-end pipelines for single cell bacterial analysis. I provided computational support for genomics research on previously unsequenced ocean-dwelling bacteria, in an attempt to improve our understanding of carbon sequestration cycles and global warming.



Washington University in St. Louis

• United States
• Higher Education
• 700 & Above Employee

• Senior Programmer Analyst

  • Jan 2009 - Dec 2012

  I was the lead analyst on projects ranging from 10 samples to 7000. I wrote large sections of the main analysis pipeline and infrastructure. I was second author on Somatic Sniper, a somatic mutation calling algorithm for next generation sequencing. I contributed to the improvement of Pindel, an indel caller, with Dr. Kai Ye.

• Programmer Analyst

  • Jan 2008 - Jan 2009

  Designed several next generation sequencing pipelines. Used Decision trees and clustering to inform bioinformatics analysis.