Experience

Max Planck Institute for Molecular Genetics (MPI-MG)

• Germany
• Research Services
• 100 - 200 Employee

• Researcher Phd Candidate

  • Jun 2019 - Present

  - Development and implementation of a pipeline for systematic analysis of enhancer RNAs - Evaluation, improvement, and utilization of previously published statistical and ML-based tools for optimizing the pipelines - Statistical analysis and integration of multi-omics data (RNA-Seq, ChIP-Seq, CUT&RUN, ATAC-Seq, WGBS/RRBS) from cohorts and publicly available datasets in order to ask and address relevant biological questions - Regularly reporting progress and new findings in verbal or writing forms - Data visualization for scientific communication with both colleagues and the public - Regularly following the literature in order to be in the know of the cutting-edge research Show less



Acıbadem Üniversitesi

• Higher Education
• 400 - 500 Employee

• Graduate Student

  • Jul 2016 - Dec 2018

  MSc Thesis: Integration of Multi-Omics data for predicting individual colon cancer etiology, supervised by Prof. Ugur Sezerman - Integration of multi-omics data (RNA-Seq, miRNA-Seq, Methylation array) with systems biology approach to reveal underlying mechanisms in colon cancer, using public datasets. - Integration of epigenetics data (methylation and transcriptome) for identification of non-invasive early biomarkers for head and neck squamous sarcoma. - WGBS analysis for revealing methylation patterns in patients with coronary artery disease - Working with collaborators from different backgrounds (biologists, medical doctors as well as bioinformaticians), handling effective communication - Data visualization and reporting findings to collaborators and colleagues. Teaching Assistantship: - Bioinformatics (Fundamentals and basics of machine learning methods, RNAseq analysis, in R for medicine students) Show less



Sabanci University

• Türkiye
• Higher Education
• 700 & Above Employee

• Teaching Assistant

  • Feb 2015 - Jun 2016

  - Introduction to Computing (Teaching Assistant, C++ course for engineering students) - Calculus I & II (peer moderator) - Natural Sciences I & II (peer moderator) - Introduction to Computing (Teaching Assistant, C++ course for engineering students) - Calculus I & II (peer moderator) - Natural Sciences I & II (peer moderator)



KU Leuven

• Belgium
• Research Services
• 700 & Above Employee

• Summer Intern

  • Jun 2015 - Sep 2015

  - Analysis of various S. cerevisiae strains' genomes to reveal horizontal gene transfers. - Analysis of various S. cerevisiae strains' genomes to reveal horizontal gene transfers.